Package: rarefun 0.1.0

rarefun: Functions for Rare Events Analysis

Functions for detecting and analyzing rare events in data. Implements isolation forest (Liu et al., 2008, <doi:10.1109/ICDM.2008.17>) and clustering for anomaly detection in time series residuals. Decomposes time series using LOESS (Locally Estimated Scatterplot Smoothing) or STL (Seasonal-Trend decomposition using LOESS). Detects marine heatwaves and cold spells following Hobday et al. (2016) <doi:10.1016/j.pocean.2015.12.014>. Provides goodness-of-fit tests for quantile regression (Haupt et al., 2011, <doi:10.1080/02664763.2011.573542>), partial dependence with quantile random forests, MCC (Matthews Correlation Coefficient) computation and testing, knee-point detection via the Kneedle algorithm (Satopaa et al., 2011, <doi:10.1109/ICDCSW.2011.20>), and spatial point matching.

Authors:Vyacheslav Lyubchich [aut, cre], Geneviève Nesslage [aut]

rarefun_0.1.0.tar.gz
rarefun_0.1.0.zip(r-4.7)rarefun_0.1.0.zip(r-4.6)rarefun_0.1.0.zip(r-4.5)
rarefun_0.1.0.tgz(r-4.6-any)rarefun_0.1.0.tgz(r-4.5-any)
rarefun_0.1.0.tar.gz(r-4.7-any)rarefun_0.1.0.tar.gz(r-4.6-any)
rarefun_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
rarefun/json (API)
NEWS

# Install 'rarefun' in R:
install.packages('rarefun', repos = c('https://vlyubchich.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/vlyubchich/rarefun/issues

Datasets:
  • Annapolis - Annapolis Daily Daymet Time Series

On CRAN:

Conda:

3.54 score 1 stars 9 exports 33 dependencies

Last updated from:62c88016a4. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK163
source / vignettesOK217
linux-release-x86_64OK151
macos-release-arm64OK125
macos-oldrel-arm64OK118
windows-develOK105
windows-releaseOK101
windows-oldrelOK102
wasm-releaseOK135

Exports:gof_qrkneedlematch_spatial_pointsmccpartial_qrfrare_dbscanrare_heatwavesrare_iforestrare_residuals

Dependencies:bootclicodetoolscpp11dbscanfarverforeachgenericsgeosphereggplot2gluegtableisobandisotreeiteratorsjsonlitelabelinglatticelifecyclepdpR6RANNrbibutilsRColorBrewerRcppRdpackRhpcBLASctlrlangS7scalesvctrsviridisLitewithr